f nucleatum atcc 25586 strain (ATCC)

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ATCC f nucleatum atcc 25586 strain
F Nucleatum Atcc 25586 Strain, supplied by ATCC, used in various techniques. Bioz Stars score: 97/100, based on 1476 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/f+nucleatum+atcc+25586/Fusobacterium+nucleatum%3B+subsp%2E+nucleatum%3B+Strain+VPI+4355/pm41803883-88-0-1
Average 97 stars, based on 1476 article reviews

f nucleatum atcc 25586 strain - by Bioz Stars, 2026-10

97/100 stars

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Bacteria:

Article Title: Impact of saliva on the efficacy of antiseptics against selected periopathogens.
Article Snippet: This is a PDF of an article that has undergone enhancements after acceptance, such as the addition of a cover page and metadata, and formatting for readability.. This version will undergo additional copyediting, typesetting and review before it is published in its final form.. As such, this version is no longer the Accepted Manuscript, but it is not yet the definitive Version of Record; we are providing this early version to give early visibility of the article.

Sequencing:

Article Title: Fusobacterium nucleatum manipulates host autophagy to promote its intracellular survival and treatment resistance in nasopharyngeal carcinoma.
Article Snippet: .. The FadA gene from F. nucleatum ATCC 25586 was used as the reference sequence for a BLASTn search against a local database comprising all 174 genomes, with the following parameters: “- outfmt 6; -evalue 1e-50; -perc_identity 80”. ..

RNA Sequencing:

Article Title: Cross-feeding interactions between Fusobacterium nucleatum and the glycan forager Segatella oris .
Article Snippet: .. For bacterial RNA seq, coding sequences for all annotated genes and riboswitches, gene names, and locus tags were extracted from the F. nucleatum ATCC 25586 (NZ_CP028101) and S. oris NCTC 17031 (NZ_LR134384) genomes in Geneious Prime (2024.0.7) and converted to FASTA format via the “Tabular-to-fasta” tool via the Galaxy server (https://usegalaxy.org/), and indexed with Salmon (37) for quasi-mapping of reads. ..

Article Title: Cross-feeding interactions between Fusobacterium nucleatum and the glycan forager Segatella oris
Article Snippet: .. For bacterial RNA seq, coding sequences for all annotated genes and riboswitches, gene names, and locus tags were extracted from the F. nucleatum ATCC 25586 ( NZ_CP028101 ) and S. oris NCTC 17031 ( NZ_LR134384 ) genomes in Geneious Prime (2024.0.7) and converted to FASTA format via the “Tabular-to-fasta” tool via the Galaxy server ( https://usegalaxy.org/ ), and indexed with Salmon ( ) for quasi-mapping of reads. ..

Gene Expression:

Article Title: Modelling Fusobacterium lifestyles transitions by integrating transcriptomics and growth data
Article Snippet: .. Subsequently, reads have been mapped to the genome of F. nucleatum ATCC 25586 ( NZ_CP028101.1 ) using Bowtie2 , and gene expression was quantified using HTSeq 2.0. ( ) with the “intersection-nonempty” mode to resolve reads spanning multiple genes. ..

Positive Control:

Article Title: Analysis of Fusobacterium nucleatum Driven Modulation of c-Myc Pathways in Oral Carcinogenesis
Article Snippet: .. F. nucleatum ATCC 25586 was used as the positive control. ..

Derivative Assay:

Article Title: Modelling Fusobacterium lifestyles transitions by integrating transcriptomics and growth data
Article Snippet: .. It is important to clarify that the transcriptomic data integrated into the model were derived from F. animalis strain 7_1 , whereas the reconstructed genome-scale metabolic model corresponds to F. nucleatum ATCC 25586. ..

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